Table 6 Comparison of the macro AveP with feature retrieval on distantly related and final dataset
From: PCVR: a pre-trained contextualized visual representation for DNA sequence classification
Method | Dist. related | Final | |||
|---|---|---|---|---|---|
| Â | Supk. | Phyl. | Supk. | Phyl. | Genus |
BERTax w/o fine-tuning | 87.88 | 35.90 | 87.88 | 46.96 | 13.76 |
BERTax w/ fine-tuning | - | - | 98.63 | 95.48 | 63.62 |
Ours w/o fine-tuning | 81.14 | 54.10 | 90.73 | 80.53 | 37.25 |
Ours w/ fine-tuning | 90.57 | 72.21 | 98.97 | 96.16 | 63.89 |