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Table 1 Example of data format for the configuration file HPC_T_Assembly.txt in the case of multiple organisms.

From: HPC-T-Assembly: a pipeline for de novo transcriptome assembly of large multi-specie datasets

#Ankistrodesmus sp

User_path/SRR21282135_1.fastq, User_path/SRR21282135_2.fastq

User_path/SRR21282136_1.fastq, User_path/SRR21282136_2.fastq

User_path/SRR21282137_1.fastq, User_path/SRR21282137_2.fastq

#Tetraedron minutum

User_path/SRR1174749_1.fastq, User_path/SRR1174749_2.fastq

User_path/SRR3478626_1.fastq, User_path/SRR3478626_2.fastq

User_path/SRR3478627_1.fastq, User_path/SRR3478627_2.fastq

#Tetraselmis chuii

User_path/SRR1296875_1.fastq, User_path/SRR1296875_2.fastq

 
  1. The data have already been published and are available on NCBI (see Availability of data and materials in the Declaration section)