Table 1 Overview of collected GWAS datasets
From: PRED-LD: efficient imputation of GWAS summary statistics
GWAS | Database | Database ID | Sample size | Number of SNPs | Population | Platform |
|---|---|---|---|---|---|---|
ADHD | dbGaP | phs001869.v1.p1 | 1,001 | 247,475 | EUR | Illumina Infinium PsychArray-24 |
UACR | GWAS Atlas | 4061 | 31,164 | 90,283 | EUR | Illumina HumanExome chip |
GFR | GWAS Atlas | 4053 | 14,308 | 64,719 | EUR | Illumina HumanExome chip |
GFR | GWAS Atlas | 4054 | 2,162 | 59,504 | AFR | Illumina HumanExome chip |
Epilepsy | GWAS Atlas | 4160 | 24,927 | 4,948,714 | EUR | Illumina OmniExpress-24 v1.1 |
Colorectal Cancer | GWAS Atlas | 4097 | 33,870 | 7,492,477 | EAS | Illumina OmniExpress |
Double Eyelid | GWAS Atlas | 4021 | 5,614 | 549,759 | EAS | Custom Affymetrix Axiom array |
CAD | GWAS Atlas | 3925 | 148,815 | 9,024,593 | EUR | UK Biobank SNP array |