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Table 2 Results of Benchmarking Models

From: DMoVGPE: predicting gut microbial associated metabolites profiles with deep mixture of variational Gaussian Process experts

Dataset

MelonnPan

SparseNED

MiMeNet

mNODE

VGPR

DMoVGPE

MFGM

0.546 ± 0.031

0.490 ± 0.040

0.546 ± 0.005

0.561 ± 0.095

0.525 ± 0.043

0.566 ± 0.042

ASD

0.583 ± 0.029

0.520 ± 0.082

0.406 ± 0.028

0.696 ± 0.072

0.620 ± 0.080

0.703 ± 0.104

INFANTS_DIABETES

0.680 ± 0.056

0.714 ± 0.016

0.577 ± 0.021

0.682 ± 0.038

0.720 ± 0.047

0.728 ± 0.044

PRETERMS

0.715 ± 0.015

0.743 ± 0.037

0.685 ± 0.016

0.740 ± 0.106

0.785 ± 0.040

0.797 ± 0.033

SINHA_CRC

0.509 ± 0.027

0.562 ± 0.028

0.396 ± 0.017

0.524 ± 0.037

0.581 ± 0.035

0.612 ± 0.059

ADENOMAS

0.654 ± 0.042

0.531 ± 0.039

0.542 ± 0.005

0.624 ± 0.053

0.637 ± 0.043

0.667 ± 0.058

BIO_ML

0.711 ± 0.059

0.686 ± 0.033

0.735 ± 0.003

0.667 ± 0.089

0.722 ± 0.026

0.749 ± 0.024

IBD_RELATIVES

0.630 ± 0.027

0.756 ± 0.046

0.649 ± 0.008

0.703 ± 0.055

0.779 ± 0.057

0.790 ± 0.016

IBS

0.248 ± 0.034

0.265 ± 0.022

0.369 ± 0.006

0.441 ± 0.087

0.305 ± 0.053

0.465 ± 0.051

CRC

0.486 ± 0.036

0.500 ± 0.015

0.520 ± 0.007

0.408 ± 0.084

0.575 ± 0.017

0.555 ± 0.034

GC

0.312 ± 0.046

0.607 ± 0.035

0.615 ± 0.016

0.633 ± 0.067

0.772 ± 0.043

0.669 ± 0.063

ESRD

0.419 ± 0.046

0.599 ± 0.017

0.498 ± 0.011

0.565 ± 0.042

0.645 ± 0.019

0.634 ± 0.036

IBD

0.708 ± 0.023

0.847 ± 0.026

0.703 ± 0.016

0.827 ± 0.036

0.857 ± 0.025

0.857 ± 0.027

IBDMDB

0.635 ± 0.040

0.663 ± 0.022

0.551 ± 0.003

0.551 ± 0.046

0.666 ± 0.017

0.674 ± 0.020

Average

0.560

0.606

0.556

0.616

0.655

0.676