Table 2 ChIPbinner identifies differentially bound regions in broad histone marks with greater precision than csaw
Histone mark | Metric | ChIPbinner | csaw |
|---|---|---|---|
H3K36me2 | Precision | 1.00 | 0.670 |
Specificity | 1.00 | 0.906 | |
Sensitivity | 0.998 | 0.998 | |
F1 score | 0.999 | 0.801 | |
H3K4me1 | Precision | 1.00 | 0.688 |
Specificity | 1.00 | 0.932 | |
Sensitivity | 0.923 | 0.998 | |
F1 score | 0.960 | 0.815 | |
H3K27me3 | Precision | 1.00 | 0.957 |
Specificity | 1.00 | 0.995 | |
Sensitivity | 0.961 | 0.961 | |
F1 score | 0.980 | 0.960 | |
H3K9me3 | Precision | 1.00 | 1.00 |
Specificity | 1.00 | 1.00 | |
Sensitivity | 0.958 | 0.962 | |
F1 score | 0.978 | 0.981 |