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Table 2 Model performance using only Hi-C data as input

From: DconnLoop: a deep learning model for predicting chromatin loops based on multi-source data integration

Chromosome

Method

PRAUC

F1 Score

MCC

Chr 15

DconnLoop

0.982

0.932

0.868

DLoopCaller

0.925

0.889

0.807

Peakachu

0.966

0.905

0.705

Chr 16

DconnLoop

0.978

0.942

0.883

DLoopCaller

0.924

0.887

0.804

Peakachu

0.966

0.905

0.706

Chr 17

DconnLoop

0.982

0.945

0.888

DLoopCaller

0.932

0.908

0.830

Peakachu

0.966

0.905

0.707

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BMC Bioinformatics

ISSN: 1471-2105

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