Table 4 Main results on JNLPBA and NCBI Disease datasets for flat BioNER task
Model | LM | JNLPBA | NCBI disease | ||||
|---|---|---|---|---|---|---|---|
P(%) | R(%) | F(%) | P(%) | R(%) | F(%) | ||
BioBERT | – | 72.68 | 83.21 | 77.59 | 89.04 | 89.69 | 89.36 |
PubMedBERT | – | – | – | 79.16 | – | – | 88.04 |
BioNER-LLaMA | LLaMA-7B | – | – | – | 87.40 | 88.60 | 88.00 |
BINDER | PubMedBERT-base | – | – | 80.30 | – | – | 90.90 |
Our Bean | BioBERT | 74.97 | 86.81 | 80.46 | 89.71 | 91.06 | 90.38 |