From: CamITree: a streamlined software for phylogenetic analysis of viral and mitochondrial genomes
Software or applications
Source
URL
MAFFT
[15]
https://mafft.cbrc.jp/alignment/server/index.html
MACSE v2
[20]
https://www.agap-ge2pop.org/macse/
trimAl
[21]
https://github.com/inab/trimal/
IQ-TREE 2
[24]
http://www.iqtree.org/
MrBayes
[25]
https://nbisweden.github.io/MrBayes/
ALTER
[22]
http://sing.ei.uvigo.es/ALTER/
FigTree
[31]
https://github.com/rambaut/figtree/
wASTRAL
[33]
https://github.com/chaoszhang/ASTER