Table 3 ARPIP performance in gap character inference by simulation. Performance is shown individually for each internal node
From: Single-character insertion–deletion model preserves long indels in ancestral sequence reconstruction
Lineage/Clade | Gap consistency/accuracy (%) | ||
|---|---|---|---|
Precision | Recall | F-score | |
Murinae | \(98.74 \pm 5.24\) | \(99.93 \pm 1.10\) | \(99.31 \pm 1.60\) |
Homo-Pan | \(99.99 \pm 0.11\) | \(99.9995 \pm 0.02\) | \(99.9970 \pm 0.06\) |
Homininae | \(99.98 \pm 0.20\) | \(99.94 \pm 1.51\) | \(99.95 \pm 0.97\) |
Catarrhini | \(98.48 \pm 1.75\) | \(99.96 \pm 0.60\) | \(99.71 \pm 0.99\) |
Euarchontoglires | \(77.71\pm 17.22\) | \(85.49 \pm 17.46\) | \(79.44\pm 15.07\) |