Table 6 Performance comparison of MIPPIS with structure-based methods on 31 proteins with bound and unbound structures
From: MIPPIS: protein–protein interaction site prediction network with multi-information fusion
Btest_31 | UBtest_31 | |||
|---|---|---|---|---|
MCC | AUPRC | MCC | AUPRC | |
DeepPPISP | 0.163 | 0.223 | 0.162 | 0.217 |
SPPIDER | 0.240 | 0.315 | 0.222 | 0.260 |
MaSIF-site | 0.217 | 0.299 | 0.141 | 0.225 |
GraphPPIS | 0.328 | 0.395 | 0.280 | 0.323 |
Our MODEL | 0.403 | 0.469 | 0.380 | 0.436 |