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Table 3 Topological properties and enrichment analysis of gene sets in \(\mathcal {C_{G,\delta }^*}\)

From: Mining contextually meaningful subgraphs from a vertex-attributed graph

Topological properties

"% of closed gene sets enriched with signatures

\(\delta\)

\(|\mathcal {C_{G,\delta }^*}|\)

\(\overline{|V_{sub}|}\)

\(\overline{|E_{sub}|}\)

\(\overline{\rho _{sub}}\)

KEGG

CGN

CM

CC

MF

C6

1

77,400

122

319

0.09

90

86

96

88

97

91

2

77,378

121

315

0.09

90

86

96

88

97

91

3

77,214

119

308

0.09

90

86

96

88

97

91

4

76,350

115

297

0.09

90

86

96

88

97

91

5

73,334

108

282

0.09

90

86

96

88

97

91

6

65,958

101

266

0.09

91

86

97

87

97

91

7

52,953

94

251

0.09

92

88

97

87

98

92

8

36,291

88

238

0.09

93

89

97

87

98

94

9

20,618

82

225

0.10

93

91

97

87

99

95

10

9667

76

208

0.11

93

92

96

87

99

95

11

3824

68

186

0.13

92

92

94

88

98

93

12

1303

60

162

0.15

92

93

91

90

97

91