Table 1 An example of nucleotide localized information matrix
From: Predicting RNA sequence-structure likelihood via structure-aware deep learning
nt | Motif1 | Motif1 FE | Motif 2 | Motif2 FE |
|---|---|---|---|---|
C | None | 0 | None | 0 |
A | Stack | – 210 | None | 0 |
G | Stack | – 150 | Stack | – 210 |
G | Hairpin loop | 590 | Stack | – 150 |
A | Hairpin loop | 590 | None | 0 |
G | Hairpin loop | 590 | None | 0 |
C | Hairpin loop | 590 | None | 0 |
U | Hairpin loop | 590 | Stack | – 150 |
C | Stack | – 150 | Stack | – 210 |
U | Stack | – 210 | None | 0 |
U | None | 0 | None | 0 |
C | None | 0 | None | 0 |