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Table 2 The resolution-specific parameter sets used by our compression pipeline: Window Size, Threshold, Distance Table Precision, Domain Values Precision, and Balancing Weights Precision. The parameter values are optimized using the Tree-structured Parzen Estimator (TPE) algorithm

From: HiCMC: High-Efficiency Contact Matrix Compressor

Resolution

5 kb

10 kb

25 kb

50 kb

100 kb

250 kb

Window Size

32

16

8

4

4

4

Threshold

5.0

7.5

13.5

15.0

45.0

45.0

Distance Table Precision

10

10

10

10

10

10

Domain Values Precision

10

10

10

11

11

18

Balancing Weights Precision

12

10

10

12

12

12