Table 1 Search types
From: VAIV bio-discovery service using transformer model and retrieval augmented generation
Query type | Example |
|---|---|
(1) Basic query search (operator/filter) | • Search for documents with calcium and anoxia in the title → (calcium[Title]) AND (anoxia[Title]) [PubMed] |
(2)Entity or relation search | • What diseases co-occur most with calcium in the document collection? I would like to search for documents with calcium and related diseases • What diseases are associated with calcium in the papers containing the MeSH term ‘child’? • What gene/proteins have the “ACTIVATOR” interaction with calcium? List them by frequency order and show the documents |
(3) Natural language query search | • What methods can be used for detecting beta thalassemias? • What chemical compounds inhibit the activation of BRCA1? |