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Fig. 5 | BMC Bioinformatics

Fig. 5

From: C-ziptf: stable tensor factorization for zero-inflated multi-dimensional genomics data

Fig. 5

Metrics used in selecting the optimal rank for running C-ZIPTF on real single-cell RNA sequencing dataset [48] of immune cells stimulated with interferon beta (IFN-\(\beta\)): a explained variance and cophenetic correlation within a range of ranks from 2 to 14, b the K-means inertia and silhouette score were evaluated across varying numbers of clusters of gene latent factors, while keeping the rank fixed at 8

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