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Table 5 Association of identified SSRs in the same genes listed in Table 4 between Escherichia coli groups of the K12 and O157 strains using SATIN. Note that the gene b0829 was identified by the name “gsiA”

From: SATIN: a micro and mini satellite mining tool of total genome and coding regions with analysis of perfect repeats polymorphism in coding regions

SSR

Gene

AOV

AOV

AOV

AOV

AOV

SHAPIRO–WILK

SHAPIRO–WILK

KRUSKAL–WALLIS

KRUSKAL–WALLIS

Pr(> F)

F_value

Mean_Sq

Sum_Sq

Df

W

P-value

chi_squared

p_value

(A)9

yibA

1.45 × 10–72

2500

24.51

24.51

1

0.6363

1.57 × 10–14

1

6.54 × 10–23

(C)8

gsiA

2.66 × 10–11

56.25

7147

7147

1

0.5503

3.71 × 10–16

1

1.64 × 10–09

(CGG)5

ftsZ

4.10 × 10–10

48.08

6127

6127

1

0.5341

1.94 × 10–16

1

1.03 × 10–08

(GC)6

mhpR

1.43 × 10–06

26.31

4324

4324

1

0.5649

6.73 × 10–16

1

 4.50 × 10–06 

(GCTG)4

hisC

1.08 × 10–10

52

6627

6627

1

0.5424

2.70 × 10–16

1

4.15 × 10–09

  1. *AOV, Analysis of variance