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Table 1 Experimental databases included in the dataset

From: Dyport: dynamic importance-based biomedical hypothesis generation benchmarking technique

 

Pairs

Concepts

Concept types

Database

   

KEGG

730,214

22,306

Genes, Diseases, Chemicals

CTD

459,229

37,065

Genes, Diseases, Chemicals

DisGenNET

274,320

18,923

Genes, Diseases

DrugCentral

230,805

19,066

Genes, Diseases, Chemicals

RxNav

175,186

2804

Chemicals

STRING

63,904

9118

Proteins

Mentha

43,673

10,096

Proteins

GWAS

30,350

8905

Genes, Diseases

  1. Reported numbers are for cross-referenced pairs of UMLS CUI concepts (edges) and the corresponding nodes from the network G