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Table 6 Comparison with sORFfinder

From: MiPepid: MicroPeptide identification tool using machine learning

Method

Blind test set

Positive

Negative

Overall

#Correct

Accuracy

#Correct

Accuracy

F1

Accuracy

sORFfinder

708

0.86

506

0.89

0.89

0.87

MiPepid (our method)

789

0.96

542

0.96

0.96

0.96

  1. positive: the positive subset of the blind test set;
  2. negative: the negative subset of the blind test set;
  3. overall: the overall performance on the blind test set;
  4. #correct: the number of correctly classified cases by a method;
  5. accuracy: #correct divided by the total number of cases in that dataset/subset;
  6. F1: the F1 score
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BMC Bioinformatics

ISSN: 1471-2105

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