Figure 1
From: Comparative studies of differential gene calling using RNA-Seq data
Gene lengths and differential gene-calling performance. Differential gene-calling performance of DESeq (blue circles) and NOISeq (red squares) is plotted againt transcript length (bp). The transcripts are binned according to their lengths with 100bp increment. For each bin, the proportion of transcripts called differentially expressed by each method (A) and the precision of calling differentially expressed genes by each method (B) are plotted. The thresholds used are q=0.2 for DESeq and P NOI =0.8 for NOISeq. The same patterns were observed when different threshold values were used (data not shown).